IL_9MQS_004

3D structure

PDB id

9MQS (explore in PDB, NAKB, or RNA 3D Hub)

Description

CryoEM Structure of the Candida albicans Group I Intron-GMP Complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUU*AUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9MQS_004 not in the Motif Atlas

Geometric match to IL_3BNN_008

Geometric discrepancy: 0.1612

The information below is about IL_3BNN_008

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_71625.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

79

Unit IDs

9MQS|1|A|C|204
9MQS|1|A|U|205
9MQS|1|A|U|206
*
9MQS|1|A|A|242
9MQS|1|A|U|243
9MQS|1|A|G|244

Current chains

Chain A

RNA (332-MER)

Nearby chains