IL_9MR4_017
3D structure
- PDB id
- 9MR4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- NAC: Ribosome nascent chain complex(Oxa1L)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.65 Å
Loop
- Sequence
- CCGG*CG
- Length
- 6 nucleotides
- Bulged bases
- 9MR4|1|5|C|340
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9MR4_017 not in the Motif Atlas
- Homologous match to IL_8GLP_017
- Geometric discrepancy: 0.1485
- The information below is about IL_8GLP_017
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_26092.1
- Basepair signature
- cWW-tHS-cWW
- Number of instances in this motif group
- 29
Unit IDs
9MR4|1|5|C|339
9MR4|1|5|C|340
9MR4|1|5|G|341
9MR4|1|5|G|342
*
9MR4|1|8|C|32
9MR4|1|8|G|33
Current chains
- Chain 5
- 28S rRNA
- Chain 8
- 5.8S rRNA
Nearby chains
- Chain C
- 60S ribosomal protein L4
- Chain L
- Large ribosomal subunit protein eL13
- Chain N
- Ribosomal protein L15
- Chain j
- Ribosomal protein L37
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