IL_9MTQ_052

3D structure

PDB id

9MTQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site GGD-mutant Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.55A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.55 Å

Loop

Sequence

UG*CACAA

Length

7 nucleotides

Bulged bases

9MTQ|1|1A|C|1584

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9MTQ_052 not in the Motif Atlas

Geometric match to IL_9DFE_053

Geometric discrepancy: 0.1232

The information below is about IL_9DFE_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_00881.1

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

2

Unit IDs

9MTQ|1|1A|U|1415
9MTQ|1|1A|G|1416
*
9MTQ|1|1A|C|1582
9MTQ|1|1A|A|1583
9MTQ|1|1A|C|1584
9MTQ|1|1A|A|1586
9MTQ|1|1A|A|1587

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains