IL_9MTR_224

3D structure

PDB id

9MTR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site GGS-mutant Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.80A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

UG*CACAA

Length

7 nucleotides

Bulged bases

9MTR|1|2A|C|1584

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9MTR_224 not in the Motif Atlas

Geometric match to IL_9DFE_053

Geometric discrepancy: 0.1235

The information below is about IL_9DFE_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_52564.1

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

2

Unit IDs

9MTR|1|2A|U|1415
9MTR|1|2A|G|1416
*
9MTR|1|2A|C|1582
9MTR|1|2A|A|1583
9MTR|1|2A|C|1584
9MTR|1|2A|A|1586
9MTR|1|2A|A|1587

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains