IL_9N3I_010

3D structure

PDB id

9N3I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Vibrio cholerae Glycine Riboswitch - glycine bound at 2.9A resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

CGAAG*CAG

Length

8 nucleotides

Bulged bases

9N3I|1|A|A|174

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9N3I_010 not in the Motif Atlas

Homologous match to IL_3OXE_002

Geometric discrepancy: 0.0823

The information below is about IL_3OXE_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_70784.2

Basepair signature

cWW-cWW-L-cWW-L

Number of instances in this motif group

7

Unit IDs

9N3I|1|A|C|172
9N3I|1|A|G|173
9N3I|1|A|A|174
9N3I|1|A|A|175
9N3I|1|A|G|176
*
9N3I|1|A|C|211
9N3I|1|A|A|212
9N3I|1|A|G|213

Current chains

Chain A

Glycine Riboswitch

Nearby chains