IL_9N6Z_002

3D structure

PDB id

9N6Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

SSU processome maturation and disassembly, State D

Experimental method

ELECTRON MICROSCOPY

Resolution

4.74 Å

Loop

Sequence

AAACU*ACU

Length

8 nucleotides

Bulged bases

9N6Z|1|L0|C|469

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9N6Z_002 not in the Motif Atlas

Geometric match to IL_9M86_006

Geometric discrepancy: 0.3329

The information below is about IL_9M86_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_32983.2

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

8

Unit IDs

9N6Z|1|L0|A|466
9N6Z|1|L0|A|467
9N6Z|1|L0|A|468
9N6Z|1|L0|C|469
9N6Z|1|L0|U|470
*
9N6Z|1|L2|A|48
9N6Z|1|L2|C|49
9N6Z|1|L2|U|50

Current chains

Chain L0

5'ETS rRNA

Chain L2

U3 snoRNA

Nearby chains

Chain LM

U3 small nucleolar RNA-associated protein 10