IL_9N79_057

3D structure

PDB id

9N79 (explore in PDB, NAKB, or RNA 3D Hub)

Description

SSU processome maturation and disassembly, State M

Experimental method

ELECTRON MICROSCOPY

Resolution

3.93 Å

Loop

Sequence

GCCAGCGA*UUGUGAAAC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9N79|1|L1|G|1480
9N79|1|L1|C|1481
9N79|1|L1|C|1482
9N79|1|L1|A|1483
9N79|1|L1|G|1484
9N79|1|L1|C|1485
9N79|1|L1|G|1486
9N79|1|L1|A|1487
*
9N79|1|L1|U|1519
9N79|1|L1|U|1520
9N79|1|L1|G|1521
9N79|1|L1|U|1522
9N79|1|L1|G|1523
9N79|1|L1|A|1524
9N79|1|L1|A|1525
9N79|1|L1|A|1526
9N79|1|L1|C|1527

Current chains

Chain L1

18S rRNA

Nearby chains

Chain L5

40S ribosomal protein S5

Chain LC

40S ribosomal protein S16-A

Chain NP

40S ribosomal protein S19-A

Chain SI

Ribosome biogenesis protein BMS1

Chain SM

U3 small nucleolar ribonucleoprotein protein IMP4