Motif IL_74283.2 Version IL_74283.2 of this group appears in releases 4.14 to 4.14
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | break | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 1-17 | 2-16 | 7-12 | 9-10 | |||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_9PN5_216 | 9PN5 | 0.0880 | 0 | B5 | SSU rRNA | U | 1519 | U | 1520 | G | 1521 | U | 1522 | G | 1523 | A | 1524 | A | 1525 | A | 1526 | C | 1527 | * | G | 1480 | C | 1481 | C | 1482 | A | 1483 | G | 1484 | C | 1485 | G | 1486 | A | 1487 | cWW | tHW | cWW | |
| 2 | IL_9SUM_212 | 9SUM | 0.0000 | 0 | CA | SSU rRNA | U | 1494 | U | 1495 | G | 1496 | G | 1497 | G | 1498 | A | 1499 | A | 1500 | A | 1501 | C | 1502 | * | G | 1456 | C | 1457 | C | 1458 | A | 1459 | G | 1460 | C | 1461 | G | 1462 | A | 1463 | cWW | tWW | tHW | cWW |
| 3 | IL_8CRE_462 | 8CRE | 0.0767 | 0 | CM | SSU rRNA | U | 1506 | U | 1507 | G | 1508 | U | 1509 | G | 1510 | A | 1511 | A | 1512 | A | 1513 | C | 1514 | * | G | 1466 | C | 1467 | C | 1468 | A | 1469 | G | 1470 | C | 1471 | G | 1472 | A | 1473 | cWW | tWW | tHW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UUGUGAAAC*GCCAGCGA | 2 |
| UUGGGAAAC*GCCAGCGA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UGUGAAA*CCAGCG | 2 |
| UGGGAAA*CCAGCG | 1 |
Release history
| Release | 4.14 |
|---|---|
| Date | 2026-09-09 |
| Status | Updated, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Basepair signature
- cWW-tWW-L-R-L-R-L-R-L-tHW-R-L-cWW
- Heat map statistics
- Min 0.08 | Avg 0.06 | Max 0.10
Coloring options: