3D structure

PDB id
9N7B (explore in PDB, NAKB, or RNA 3D Hub)
Description
SSU processome maturation and disassembly, State O
Experimental method
ELECTRON MICROSCOPY
Resolution
3.25 Å

Loop

Sequence
GCCAGCGA*UUGUGAAAC
Length
17 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9N7B|1|L1|G|1480
9N7B|1|L1|C|1481
9N7B|1|L1|C|1482
9N7B|1|L1|A|1483
9N7B|1|L1|G|1484
9N7B|1|L1|C|1485
9N7B|1|L1|G|1486
9N7B|1|L1|A|1487
*
9N7B|1|L1|U|1519
9N7B|1|L1|U|1520
9N7B|1|L1|G|1521
9N7B|1|L1|U|1522
9N7B|1|L1|G|1523
9N7B|1|L1|A|1524
9N7B|1|L1|A|1525
9N7B|1|L1|A|1526
9N7B|1|L1|C|1527

Current chains

Chain L1
18S rRNA

Nearby chains

Chain L5
40S ribosomal protein S5
Chain LC
40S ribosomal protein S16-A
Chain NP
40S ribosomal protein S19-A
Chain NW
40S ribosomal protein S25-A
Chain SI
Ribosome biogenesis protein BMS1
Chain SM
U3 small nucleolar ribonucleoprotein protein IMP4

Coloring options:

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