IL_9N9J_164
3D structure
- PDB id
- 9N9J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a GRP94 folding intermediate engaged with a CCDC134- and FKBP11-bound secretory translocon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GAACGCG*CUAAGC
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9N9J_164 not in the Motif Atlas
- Geometric match to IL_8QYX_166
- Geometric discrepancy: 0.0879
- The information below is about IL_8QYX_166
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_41504.1
- Basepair signature
- cWW-tSH-L-R-L-tHH-cWW
- Number of instances in this motif group
- 5
Unit IDs
9N9J|1|L7|G|21
9N9J|1|L7|A|22
9N9J|1|L7|A|23
9N9J|1|L7|C|24
9N9J|1|L7|G|25
9N9J|1|L7|C|26
9N9J|1|L7|G|27
*
9N9J|1|L7|C|52
9N9J|1|L7|U|53
9N9J|1|L7|A|54
9N9J|1|L7|A|55
9N9J|1|L7|G|56
9N9J|1|L7|C|57
Current chains
- Chain L7
- 5S ribosomal RNA
Nearby chains
- Chain LD
- Large ribosomal subunit protein uL18
- Chain LJ
- Large ribosomal subunit protein uL5
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