IL_9NDP_125
3D structure
- PDB id
- 9NDP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of stalled ribosome and nascent chain in complex with NMT2 and NAC
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.82 Å
Loop
- Sequence
- GA*UAC
- Length
- 5 nucleotides
- Bulged bases
- 9NDP|1|5|A|4203
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9NDP_125 not in the Motif Atlas
- Homologous match to IL_8GLP_137
- Geometric discrepancy: 0.0542
- The information below is about IL_8GLP_137
- Detailed Annotation
- AG tHS outside loop
- Broad Annotation
- AG tHS outside loop
- Motif group
- IL_14190.4
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 175
Unit IDs
9NDP|1|5|G|4191
9NDP|1|5|A|4192
*
9NDP|1|5|U|4202
9NDP|1|5|A|4203
9NDP|1|5|C|4204
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain I
- 60S ribosomal protein L10
- Chain T
- eL21
- Chain b
- Large ribosomal subunit protein eL29
- Chain o
- Ribosomal protein L36a
Coloring options: