IL_9NDP_210
3D structure
- PDB id
- 9NDP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of stalled ribosome and nascent chain in complex with NMT2 and NAC
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.82 Å
Loop
- Sequence
- GAGC*GUCC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9NDP_210 not in the Motif Atlas
- Geometric match to IL_1JID_002
- Geometric discrepancy: 0.208
- The information below is about IL_1JID_002
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_15225.4
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 38
Unit IDs
9NDP|1|K|G|692
9NDP|1|K|A|693
9NDP|1|K|G|694
9NDP|1|K|C|695
*
9NDP|1|K|G|731
9NDP|1|K|U|732
9NDP|1|K|C|733
9NDP|1|K|C|734
Current chains
- Chain K
- 18S rRNA
Nearby chains
- Chain BB
- 40S ribosomal protein S7
- Chain TT
- Ribosomal protein S15a
Coloring options: