IL_9NDP_214
3D structure
- PDB id
- 9NDP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of stalled ribosome and nascent chain in complex with NMT2 and NAC
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.82 Å
Loop
- Sequence
- UUG*CUA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9NDP_214 not in the Motif Atlas
- Homologous match to IL_9PN5_179
- Geometric discrepancy: 0.2379
- The information below is about IL_9PN5_179
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_71625.5
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 85
Unit IDs
9NDP|1|K|U|805
9NDP|1|K|U|806
9NDP|1|K|G|807
*
9NDP|1|K|C|856
9NDP|1|K|U|857
9NDP|1|K|A|858
Current chains
- Chain K
- 18S rRNA
Nearby chains
- Chain EE
- Ribosomal protein S11
- Chain TT
- Ribosomal protein S15a
- Chain x
- eS4
Coloring options: