IL_9NDP_215

3D structure

PDB id

9NDP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of stalled ribosome and nascent chain in complex with NMT2 and NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.82 Å

Loop

Sequence

GAAAAAAUU*ACCGCAGC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NDP|1|K|G|807
9NDP|1|K|A|808
9NDP|1|K|A|809
9NDP|1|K|A|810
9NDP|1|K|A|811
9NDP|1|K|A|812
9NDP|1|K|A|813
9NDP|1|K|U|814
9NDP|1|K|U|815
*
9NDP|1|K|A|849
9NDP|1|K|C|850
9NDP|1|K|C|851
9NDP|1|K|G|852
9NDP|1|K|C|853
9NDP|1|K|A|854
9NDP|1|K|G|855
9NDP|1|K|C|856

Current chains

Chain K

18S rRNA

Nearby chains

Chain DD

Ribosomal protein S9 (Predicted)

Chain EE

Ribosomal protein S11

Chain TT

Ribosomal protein S15a

Chain x

eS4