IL_9NDP_242
3D structure
- PDB id
- 9NDP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of stalled ribosome and nascent chain in complex with NMT2 and NAC
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.82 Å
Loop
- Sequence
- UGG*UCUGUGA
- Length
- 10 nucleotides
- Bulged bases
- 9NDP|1|K|U|1494, 9NDP|1|K|G|1497
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9NDP_242 not in the Motif Atlas
- Homologous match to IL_9H3G_221
- Geometric discrepancy: 0.1209
- The information below is about IL_9H3G_221
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_09439.2
- Basepair signature
- cWW-L-R-L-cWW-L
- Number of instances in this motif group
- 4
Unit IDs
9NDP|1|K|U|1333
9NDP|1|K|G|1334
9NDP|1|K|G|1335
*
9NDP|1|K|U|1492
9NDP|1|K|C|1493
9NDP|1|K|U|1494
9NDP|1|K|G|1495
9NDP|1|K|U|1496
9NDP|1|K|G|1497
9NDP|1|K|A|1498
Current chains
- Chain K
- 18S rRNA
Nearby chains
- Chain 9
- eS29
- Chain GG
- uS10
- Chain SS
- S10_plectin domain-containing protein
- Chain w
- Ribosomal protein S3
Coloring options: