IL_9NLS_104
3D structure
- PDB id
- 9NLS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli initiation complex with EQ2-YbiT in Intermediate/PtIM(b) conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- UCACU*AAA
- Length
- 8 nucleotides
- Bulged bases
- 9NLS|1|R1|A|2726
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9NLS_104 not in the Motif Atlas
- Homologous match to IL_5J7L_347
- Geometric discrepancy: 0.1012
- The information below is about IL_5J7L_347
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.11
- Basepair signature
- cWW-cWS-cSH-tWH-cWW-L
- Number of instances in this motif group
- 19
Unit IDs
9NLS|1|R1|U|2680
9NLS|1|R1|C|2681
9NLS|1|R1|A|2682
9NLS|1|R1|C|2683
9NLS|1|R1|U|2684
*
9NLS|1|R1|A|2725
9NLS|1|R1|A|2726
9NLS|1|R1|A|2727
Current chains
- Chain R1
- 23S ribosomal RNA
Nearby chains
- Chain 14
- 50S ribosomal protein L14
- Chain 17
- Large ribosomal subunit protein bL17
- Chain 19
- 50S ribosomal protein L19
- Chain 3
- 50S ribosomal protein L3
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