IL_9NO7_012
3D structure
- PDB id
- 9NO7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-N5-methylated Release Factor 1, and P-site 2'-deoxy-A76-fMEAAAKC-peptidyl-tRNAcys at 2.13A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.13 Å
Loop
- Sequence
- GAAC*GAGUGAAAUAGAGC
- Length
- 18 nucleotides
- Bulged bases
- 9NO7|1|A|U|504, 9NO7|1|A|G|508
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9NO7_012 not in the Motif Atlas
- Geometric match to IL_9DFE_012
- Geometric discrepancy: 0.0657
- The information below is about IL_9DFE_012
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_44923.2
- Basepair signature
- cWW-cWS-tSH-L-tWH-cWW-tSS-tSH-L-R-L
- Number of instances in this motif group
- 10
Unit IDs
9NO7|1|A|G|481
9NO7|1|A|A|482
9NO7|1|A|A|483
9NO7|1|A|C|484
*
9NO7|1|A|G|496
9NO7|1|A|A|497
9NO7|1|A|G|498
9NO7|1|A|U|499
9NO7|1|A|G|500
9NO7|1|A|A|501
9NO7|1|A|A|502
9NO7|1|A|A|503
9NO7|1|A|U|504
9NO7|1|A|A|505
9NO7|1|A|G|506
9NO7|1|A|A|507
9NO7|1|A|G|508
9NO7|1|A|C|509
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain W
- 50S ribosomal protein L22
- Chain Y
- 50S ribosomal protein L24
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