IL_9NO7_098
3D structure
- PDB id
- 9NO7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-N5-methylated Release Factor 1, and P-site 2'-deoxy-A76-fMEAAAKC-peptidyl-tRNAcys at 2.13A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.13 Å
Loop
- Sequence
- UUUCC*GGUAG
- Length
- 10 nucleotides
- Bulged bases
- 9NO7|1|A|U|2689, 9NO7|1|A|C|2690
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9NO7_098 not in the Motif Atlas
- Geometric match to IL_9DFE_104
- Geometric discrepancy: 0.0871
- The information below is about IL_9DFE_104
- Detailed Annotation
- UAA/GAN related, with intercalation
- Broad Annotation
- UAA/GAN related, with intercalation
- Motif group
- IL_82016.1
- Basepair signature
- cWW-L-tHS-L-cWW
- Number of instances in this motif group
- 4
Unit IDs
9NO7|1|A|U|2687
9NO7|1|A|U|2688
9NO7|1|A|U|2689
9NO7|1|A|C|2690
9NO7|1|A|C|2691
*
9NO7|1|A|G|2718
9NO7|1|A|G|2719
9NO7|1|A|U|2720
9NO7|1|A|A|2721
9NO7|1|A|G|2722
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain E
- 50S ribosomal protein L3
- Chain R
- 50S ribosomal protein L17
- Chain T
- 50S ribosomal protein L19
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