IL_9NO7_117
3D structure
- PDB id
- 9NO7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-N5-methylated Release Factor 1, and P-site 2'-deoxy-A76-fMEAAAKC-peptidyl-tRNAcys at 2.13A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.13 Å
Loop
- Sequence
- GACAAC*GCUAAUC
- Length
- 13 nucleotides
- Bulged bases
- 9NO7|1|a|U|173
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9NO7_117 not in the Motif Atlas
- Geometric match to IL_4LFB_009
- Geometric discrepancy: 0.0721
- The information below is about IL_4LFB_009
- Detailed Annotation
- tWH-tWH-tHW-tHW
- Broad Annotation
- No text annotation
- Motif group
- IL_00680.1
- Basepair signature
- cWW-L-R-tWH-L-R-L-cWW-cWW
- Number of instances in this motif group
- 3
Unit IDs
9NO7|1|a|G|148
9NO7|1|a|A|149
9NO7|1|a|C|150
9NO7|1|a|A|151
9NO7|1|a|A|152
9NO7|1|a|C|153
*
9NO7|1|a|G|168
9NO7|1|a|C|169
9NO7|1|a|U|170
9NO7|1|a|A|171
9NO7|1|a|A|172
9NO7|1|a|U|173
9NO7|1|a|C|174
Current chains
- Chain a
- 16S Ribosomal RNA
Nearby chains
- Chain t
- 30S ribosomal protein S20
Coloring options: