IL_9NO7_169
3D structure
- PDB id
- 9NO7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-N5-methylated Release Factor 1, and P-site 2'-deoxy-A76-fMEAAAKC-peptidyl-tRNAcys at 2.13A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.13 Å
Loop
- Sequence
- CGGGAG*CAG
- Length
- 9 nucleotides
- Bulged bases
- 9NO7|1|a|G|1442|||A
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9NO7_169 not in the Motif Atlas
- Geometric match to IL_5UNE_002
- Geometric discrepancy: 0.2899
- The information below is about IL_5UNE_002
- Detailed Annotation
- Isolated basepair with bulged bases
- Broad Annotation
- Isolated basepair with bulged bases
- Motif group
- IL_34117.1
- Basepair signature
- cWW-L-R-L-cWW-L
- Number of instances in this motif group
- 7
Unit IDs
9NO7|1|a|C|1440
9NO7|1|a|G|1441
9NO7|1|a|G|1442
9NO7|1|a|G|1442|||A
9NO7|1|a|A|1442|||B
9NO7|1|a|G|1443
*
9NO7|1|a|C|1459
9NO7|1|a|A|1460
9NO7|1|a|G|1461
Current chains
- Chain a
- 16S Ribosomal RNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain T
- 50S ribosomal protein L19
- Chain t
- 30S ribosomal protein S20
Coloring options: