3D structure

PDB id
9O2X (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of WT E.coli ribosome 70S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site (S)-betahydroxyBocK charged NH-tRNAPyl
Experimental method
ELECTRON MICROSCOPY
Resolution
2.29 Å

Loop

Sequence
CGAUGGUAG*CGAGAGUAG
Length
18 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9O2X|1|b|C|71
9O2X|1|b|G|72
9O2X|1|b|A|73
9O2X|1|b|U|74
9O2X|1|b|G|75
9O2X|1|b|G|76
9O2X|1|b|U|77
9O2X|1|b|A|78
9O2X|1|b|G|79
*
9O2X|1|b|C|97
9O2X|1|b|G|98
9O2X|1|b|A|99
9O2X|1|b|G|100
9O2X|1|b|A|101
9O2X|1|b|G|102
9O2X|1|b|U|103
9O2X|1|b|A|104
9O2X|1|b|G|105

Current chains

Chain b
5S rRNA

Nearby chains

Chain a
Large subunit ribosomal RNA; LSU rRNA
Chain l
Large ribosomal subunit protein uL16
Chain u
Large ribosomal subunit protein bL25

Coloring options:

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