IL_9O3I_305
3D structure
- PDB id
- 9O3I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with ketolide telithromycin, mRNA, aminoacylated A-site Lys-tRNAlys, P-site fMRC-peptidyl-tRNAmet, and deacylated E-site tRNAlys at 2.80A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.8 Å
Loop
- Sequence
- UGUAG*UGAGG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9O3I_305 not in the Motif Atlas
- Geometric match to IL_4LFB_023
- Geometric discrepancy: 0.1007
- The information below is about IL_4LFB_023
- Detailed Annotation
- tSH-tHW-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_17136.7
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 14
Unit IDs
9O3I|1|2a|U|580
9O3I|1|2a|G|581
9O3I|1|2a|U|582
9O3I|1|2a|A|583
9O3I|1|2a|G|584
*
9O3I|1|2a|U|757
9O3I|1|2a|G|758
9O3I|1|2a|A|759
9O3I|1|2a|G|760
9O3I|1|2a|G|761
Current chains
- Chain 2a
- 16S Ribosomal RNA
Nearby chains
- Chain 2A
- Large subunit ribosomal RNA; LSU rRNA
- Chain 2l
- 30S ribosomal protein S12
- Chain 2o
- 30S ribosomal protein S15
- Chain 2q
- 30S ribosomal protein S17
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