IL_9O3V_048

3D structure

PDB id

9O3V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 80S ribosome stalled on MYC nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

GGAUC*GCGCAC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9O3V|1|L5|G|1425
9O3V|1|L5|G|1426
9O3V|1|L5|A|1427
9O3V|1|L5|U|1428
9O3V|1|L5|C|1429
*
9O3V|1|L5|G|1455
9O3V|1|L5|C|1456
9O3V|1|L5|G|1457
9O3V|1|L5|C|1458
9O3V|1|L5|A|1459
9O3V|1|L5|C|1460

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LQ

Large ribosomal subunit protein eL18

Chain Lb

Large ribosomal subunit protein eL29