IL_9O3V_257
3D structure
- PDB id
- 9O3V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human 80S ribosome stalled on MYC nascent chain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- CGCU*AAAAG
- Length
- 9 nucleotides
- Bulged bases
- 9O3V|1|S2|A|1825
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9O3V_257 not in the Motif Atlas
- Homologous match to IL_9PN5_223
- Geometric discrepancy: 0.4643
- The information below is about IL_9PN5_223
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_37443.2
- Basepair signature
- cWW-cWW-L-R-cWW
- Number of instances in this motif group
- 11
Unit IDs
9O3V|1|S2|C|1708
9O3V|1|S2|G|1709
9O3V|1|S2|C|1710
9O3V|1|S2|U|1711
*
9O3V|1|S2|A|1822
9O3V|1|S2|A|1823
9O3V|1|S2|A|1824
9O3V|1|S2|A|1825
9O3V|1|S2|G|1826
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain L5
- Large subunit ribosomal RNA; LSU rRNA
- Chain Ln
- Small ribosomal subunit protein eS32
- Chain SX
- Small ribosomal subunit protein uS12
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