IL_9O3Y_235
3D structure
- PDB id
- 9O3Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human 80S ribosome bound to IDB-002 stalled on FPAK-containing nascent chain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- GACAGGA(OMU)UG*CUCGAUUC
- Length
- 18 nucleotides
- Bulged bases
- 9O3Y|1|S2|G|1285, 9O3Y|1|S2|U|1314
- QA status
- Modified nucleotides: OMU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9O3Y|1|S2|G|1281
9O3Y|1|S2|A|1282
9O3Y|1|S2|C|1283
9O3Y|1|S2|A|1284
9O3Y|1|S2|G|1285
9O3Y|1|S2|G|1286
9O3Y|1|S2|A|1287
9O3Y|1|S2|OMU|1288
9O3Y|1|S2|U|1289
9O3Y|1|S2|G|1290
*
9O3Y|1|S2|C|1309
9O3Y|1|S2|U|1310
9O3Y|1|S2|C|1311
9O3Y|1|S2|G|1312
9O3Y|1|S2|A|1313
9O3Y|1|S2|U|1314
9O3Y|1|S2|U|1315
9O3Y|1|S2|C|1316
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain SK
- Small ribosomal subunit protein eS10
- Chain SM
- Small ribosomal subunit protein eS12
- Chain Sd
- Small ribosomal subunit protein uS14
- Chain Sf
- Ubiquitin-ribosomal protein eS31 fusion protein
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