IL_9OFV_003
3D structure
- PDB id
- 9OFV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Consensus reconstruction of the eukaryotic Ribosome-associated Quality Control complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.16 Å
Loop
- Sequence
- CC*GAG
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9OFV_003 not in the Motif Atlas
- Geometric match to IL_8CRE_004
- Geometric discrepancy: 0.0726
- The information below is about IL_8CRE_004
- Detailed Annotation
- Single stack bend
- Broad Annotation
- No text annotation
- Motif group
- IL_90729.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 30
Unit IDs
9OFV|1|f|C|27
9OFV|1|f|C|28
*
9OFV|1|f|G|56
9OFV|1|f|A|57
9OFV|1|f|G|58
Current chains
- Chain f
- 25S rRNA
Nearby chains
- Chain U
- 60S ribosomal protein L35-A
- Chain W
- 60S ribosomal protein L37-A
- Chain i
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain t
- 60S ribosomal protein L13-A
Coloring options: