IL_9OFV_019
3D structure
- PDB id
- 9OFV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Consensus reconstruction of the eukaryotic Ribosome-associated Quality Control complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.16 Å
Loop
- Sequence
- GUC*GCU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9OFV_019 not in the Motif Atlas
- Geometric match to IL_8P9A_249
- Geometric discrepancy: 0.0823
- The information below is about IL_8P9A_249
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_01003.3
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 214
Unit IDs
9OFV|1|f|G|668
9OFV|1|f|U|669
9OFV|1|f|C|670
*
9OFV|1|f|G|792
9OFV|1|f|C|793
9OFV|1|f|U|794
Current chains
- Chain f
- 25S rRNA
Nearby chains
- Chain 4
- 60S ribosomal protein L18-A
- Chain N
- 60S ribosomal protein L28
- Chain l
- Large ribosomal subunit protein uL4A
- Chain t
- 60S ribosomal protein L13-A
Coloring options: