IL_9OFV_028
3D structure
- PDB id
- 9OFV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Consensus reconstruction of the eukaryotic Ribosome-associated Quality Control complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.16 Å
Loop
- Sequence
- UGAAG*UGGAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9OFV_028 not in the Motif Atlas
- Geometric match to IL_8CRE_033
- Geometric discrepancy: 0.0707
- The information below is about IL_8CRE_033
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_50730.2
- Basepair signature
- cWW-tSH-tHS-tHS-cWW
- Number of instances in this motif group
- 19
Unit IDs
9OFV|1|f|U|834
9OFV|1|f|G|835
9OFV|1|f|A|836
9OFV|1|f|A|837
9OFV|1|f|G|838
*
9OFV|1|f|U|855
9OFV|1|f|G|856
9OFV|1|f|G|857
9OFV|1|f|A|858
9OFV|1|f|G|859
Current chains
- Chain f
- 25S rRNA
Nearby chains
- Chain 5
- 60S ribosomal protein L19-A
- Chain c
- 60S ribosomal protein L43-A
- Chain j
- 60S ribosomal protein L2-A
Coloring options: