IL_9OFV_069
3D structure
- PDB id
- 9OFV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Consensus reconstruction of the eukaryotic Ribosome-associated Quality Control complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.16 Å
Loop
- Sequence
- UUAAC*GGAAGA
- Length
- 11 nucleotides
- Bulged bases
- 9OFV|1|f|G|1751
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9OFV_069 not in the Motif Atlas
- Geometric match to IL_8P9A_299
- Geometric discrepancy: 0.0648
- The information below is about IL_8P9A_299
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_25943.1
- Basepair signature
- cWW-tWH-tHH-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
9OFV|1|f|U|1694
9OFV|1|f|U|1695
9OFV|1|f|A|1696
9OFV|1|f|A|1697
9OFV|1|f|C|1698
*
9OFV|1|f|G|1747
9OFV|1|f|G|1748
9OFV|1|f|A|1749
9OFV|1|f|A|1750
9OFV|1|f|G|1751
9OFV|1|f|A|1752
Current chains
- Chain f
- 25S rRNA
Nearby chains
- Chain T
- 60S ribosomal protein L34-A
- Chain X
- Large ribosomal subunit protein eL38
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