IL_9OFV_120
3D structure
- PDB id
- 9OFV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Consensus reconstruction of the eukaryotic Ribosome-associated Quality Control complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.16 Å
Loop
- Sequence
- AUUAU*AGAAU
- Length
- 10 nucleotides
- Bulged bases
- 9OFV|1|f|A|3130
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9OFV_120 not in the Motif Atlas
- Geometric match to IL_8P9A_348
- Geometric discrepancy: 0.0834
- The information below is about IL_8P9A_348
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_08938.1
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 22
Unit IDs
9OFV|1|f|A|3103
9OFV|1|f|U|3104
9OFV|1|f|U|3105
9OFV|1|f|A|3106
9OFV|1|f|U|3107
*
9OFV|1|f|A|3127
9OFV|1|f|G|3128
9OFV|1|f|A|3129
9OFV|1|f|A|3130
9OFV|1|f|U|3131
Current chains
- Chain f
- 25S rRNA
Nearby chains
- Chain Z
- Ubiquitin-60S ribosomal protein L40
- Chain a0
- 60S ribosomal protein L16-A
- Chain q
- 60S ribosomal protein L9-A
Coloring options: