IL_9OFV_133
3D structure
- PDB id
- 9OFV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Consensus reconstruction of the eukaryotic Ribosome-associated Quality Control complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.16 Å
Loop
- Sequence
- UGUAAG*CUGAG
- Length
- 11 nucleotides
- Bulged bases
- 9OFV|1|f|G|3369
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9OFV_133 not in the Motif Atlas
- Geometric match to IL_8CRE_139
- Geometric discrepancy: 0.0554
- The information below is about IL_8CRE_139
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_70411.2
- Basepair signature
- cWW-tSH-L-tHH-L-cWW
- Number of instances in this motif group
- 7
Unit IDs
9OFV|1|f|U|3332
9OFV|1|f|G|3333
9OFV|1|f|U|3334
9OFV|1|f|A|3335
9OFV|1|f|A|3336
9OFV|1|f|G|3337
*
9OFV|1|f|C|3367
9OFV|1|f|U|3368
9OFV|1|f|G|3369
9OFV|1|f|A|3370
9OFV|1|f|G|3371
Current chains
- Chain f
- 25S rRNA
Nearby chains
- Chain 9
- Large ribosomal subunit protein eL24A
- Chain Q
- 60S ribosomal protein L31-A
- Chain e
- E3 ubiquitin-protein ligase listerin
- Chain k
- Large ribosomal subunit protein uL3
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