IL_9P79_037

3D structure

PDB id

9P79 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human Hibernating rotate3 with Z site tRNA state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GAAGGUGG*UGUUACAGC

Length

17 nucleotides

Bulged bases

9P79|1|L5|G|748, 9P79|1|L5|C|916

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P79|1|L5|G|745
9P79|1|L5|A|746
9P79|1|L5|A|747
9P79|1|L5|G|748
9P79|1|L5|G|749
9P79|1|L5|U|750
9P79|1|L5|G|751
9P79|1|L5|G|752
*
9P79|1|L5|U|911
9P79|1|L5|G|912
9P79|1|L5|U|913
9P79|1|L5|U|914
9P79|1|L5|A|915
9P79|1|L5|C|916
9P79|1|L5|A|917
9P79|1|L5|G|918
9P79|1|L5|C|919

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LM

60S ribosomal protein L14

Chain LS

60S ribosomal protein L18a