IL_9P7E_038

3D structure

PDB id

9P7E (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human Hibernating class5 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.59 Å

Loop

Sequence

GAAGGUGG*UGUUACAGC

Length

17 nucleotides

Bulged bases

9P7E|1|L5|G|748, 9P7E|1|L5|C|916

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P7E|1|L5|G|745
9P7E|1|L5|A|746
9P7E|1|L5|A|747
9P7E|1|L5|G|748
9P7E|1|L5|G|749
9P7E|1|L5|U|750
9P7E|1|L5|G|751
9P7E|1|L5|G|752
*
9P7E|1|L5|U|911
9P7E|1|L5|G|912
9P7E|1|L5|U|913
9P7E|1|L5|U|914
9P7E|1|L5|A|915
9P7E|1|L5|C|916
9P7E|1|L5|A|917
9P7E|1|L5|G|918
9P7E|1|L5|C|919

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LM

60S ribosomal protein L14

Chain LS

60S ribosomal protein L18a