IL_9P7F_037

3D structure

PDB id

9P7F (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ HHT and CHX treated A-P state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.56 Å

Loop

Sequence

GAAGGUGG*UGUUACAGC

Length

17 nucleotides

Bulged bases

9P7F|1|L5|G|748, 9P7F|1|L5|C|916

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P7F|1|L5|G|745
9P7F|1|L5|A|746
9P7F|1|L5|A|747
9P7F|1|L5|G|748
9P7F|1|L5|G|749
9P7F|1|L5|U|750
9P7F|1|L5|G|751
9P7F|1|L5|G|752
*
9P7F|1|L5|U|911
9P7F|1|L5|G|912
9P7F|1|L5|U|913
9P7F|1|L5|U|914
9P7F|1|L5|A|915
9P7F|1|L5|C|916
9P7F|1|L5|A|917
9P7F|1|L5|G|918
9P7F|1|L5|C|919

Current chains

Chain L5

28S rRNA [Homo sapiens]

Nearby chains

Chain LM

60S ribosomal protein L14

Chain LS

60S ribosomal protein L18a