IL_9P7I_198

3D structure

PDB id

9P7I (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ HHT and CHX treated human eEF1A-A/T-P-Z state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.69 Å

Loop

Sequence

GGAUAAC*GCUAA(OMU)A(OMC)

Length

15 nucleotides

Bulged bases

9P7I|1|S2|OMU|172

QA status

Modified nucleotides: OMU, OMC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P7I|1|S2|G|145
9P7I|1|S2|G|146
9P7I|1|S2|A|147
9P7I|1|S2|U|148
9P7I|1|S2|A|149
9P7I|1|S2|A|150
9P7I|1|S2|C|151
*
9P7I|1|S2|G|167
9P7I|1|S2|C|168
9P7I|1|S2|U|169
9P7I|1|S2|A|170
9P7I|1|S2|A|171
9P7I|1|S2|OMU|172
9P7I|1|S2|A|173
9P7I|1|S2|OMC|174

Current chains

Chain S2

18S rRNA [Homo sapiens]

Nearby chains

Chain LW

Ribosomal protein L24

Chain SG

40S ribosomal protein S6

Chain SY

40S ribosomal protein S24