IL_9P8I_069

3D structure

PDB id

9P8I (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ HHT and CHX treated human P-Z state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.89 Å

Loop

Sequence

CUCGCAGACCCGAGCCACG*CG

Length

21 nucleotides

Bulged bases

9P8I|1|L5|A|1701

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P8I|1|L5|C|1694
9P8I|1|L5|U|1695
9P8I|1|L5|C|1696
9P8I|1|L5|G|1697
9P8I|1|L5|C|1698
9P8I|1|L5|A|1699
9P8I|1|L5|G|1700
9P8I|1|L5|A|1701
9P8I|1|L5|C|1702
9P8I|1|L5|C|1703
9P8I|1|L5|C|1704
9P8I|1|L5|G|1705
9P8I|1|L5|A|1706
9P8I|1|L5|G|1716
9P8I|1|L5|C|1717
9P8I|1|L5|C|1718
9P8I|1|L5|A|1719
9P8I|1|L5|C|1720
9P8I|1|L5|G|1721
*
9P8I|1|L5|C|1841
9P8I|1|L5|G|1842

Current chains

Chain L5

28S rRNA [Homo sapiens]

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LF

60S ribosomal protein L7

Chain LQ

60S ribosomal protein L18

Chain LT

60S ribosomal protein L21

Chain Lb

Large ribosomal subunit protein eL29