IL_9P8I_080

3D structure

PDB id

9P8I (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ HHT and CHX treated human P-Z state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.89 Å

Loop

Sequence

CGCCCGAU*GG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P8I|1|L5|C|1911
9P8I|1|L5|G|1912
9P8I|1|L5|C|1913
9P8I|1|L5|C|1914
9P8I|1|L5|C|1915
9P8I|1|L5|G|1916
9P8I|1|L5|A|1917
9P8I|1|L5|U|1918
*
9P8I|1|L5|G|2064
9P8I|1|L5|G|2065

Current chains

Chain L5

28S rRNA [Homo sapiens]

Nearby chains

Chain LF

60S ribosomal protein L7

Chain LO

60S ribosomal protein L13a

Chain LS

60S ribosomal protein L18a

Chain Lf

60S ribosomal protein L35a