IL_9P8I_156

3D structure

PDB id

9P8I (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ HHT and CHX treated human P-Z state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.89 Å

Loop

Sequence

CUCAGUAC*GGAACCG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P8I|1|L5|C|4596
9P8I|1|L5|U|4597
9P8I|1|L5|C|4598
9P8I|1|L5|A|4599
9P8I|1|L5|G|4600
9P8I|1|L5|U|4601
9P8I|1|L5|A|4602
9P8I|1|L5|C|4603
*
9P8I|1|L5|G|4608
9P8I|1|L5|G|4609
9P8I|1|L5|A|4610
9P8I|1|L5|A|4611
9P8I|1|L5|C|4612
9P8I|1|L5|C|4613
9P8I|1|L5|G|4614

Current chains

Chain L5

28S rRNA [Homo sapiens]

Nearby chains

Chain LB

Large ribosomal subunit protein uL3

Chain LH

60S ribosomal protein L9

Chain LV

60S ribosomal protein L23

Chain Lm

Large ribosomal subunit protein eL40