IL_9P8I_197

3D structure

PDB id

9P8I (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ HHT and CHX treated human P-Z state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.89 Å

Loop

Sequence

GGAUAAC*GCUAA(OMU)A(OMC)

Length

15 nucleotides

Bulged bases

9P8I|1|S2|OMU|172

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P8I|1|S2|G|145
9P8I|1|S2|G|146
9P8I|1|S2|A|147
9P8I|1|S2|U|148
9P8I|1|S2|A|149
9P8I|1|S2|A|150
9P8I|1|S2|C|151
*
9P8I|1|S2|G|167
9P8I|1|S2|C|168
9P8I|1|S2|U|169
9P8I|1|S2|A|170
9P8I|1|S2|A|171
9P8I|1|S2|OMU|172
9P8I|1|S2|A|173
9P8I|1|S2|OMC|174

Current chains

Chain S2

18S rRNA [Homo sapiens]

Nearby chains

Chain LW

Ribosomal protein L24

Chain SG

40S ribosomal protein S6

Chain SY

40S ribosomal protein S24