IL_9P8I_233

3D structure

PDB id

9P8I (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ HHT and CHX treated human P-Z state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.89 Å

Loop

Sequence

GUAU*AGAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P8I|1|S2|G|942
9P8I|1|S2|U|943
9P8I|1|S2|A|944
9P8I|1|S2|U|945
*
9P8I|1|S2|A|981
9P8I|1|S2|G|982
9P8I|1|S2|A|983
9P8I|1|S2|C|984

Current chains

Chain S2

18S rRNA [Homo sapiens]

Nearby chains

Chain LA

60S ribosomal protein L8

Chain SB

40S ribosomal protein S3a

Chain SO

Small ribosomal subunit protein uS11