IL_9P9K_035

3D structure

PDB id

9P9K (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human 60S ribosome with EIF6

Experimental method

ELECTRON MICROSCOPY

Resolution

2.96 Å

Loop

Sequence

GAAGGUGG*UGUUACAGC

Length

17 nucleotides

Bulged bases

9P9K|1|L5|G|748, 9P9K|1|L5|C|916

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P9K|1|L5|G|745
9P9K|1|L5|A|746
9P9K|1|L5|A|747
9P9K|1|L5|G|748
9P9K|1|L5|G|749
9P9K|1|L5|U|750
9P9K|1|L5|G|751
9P9K|1|L5|G|752
*
9P9K|1|L5|U|911
9P9K|1|L5|G|912
9P9K|1|L5|U|913
9P9K|1|L5|U|914
9P9K|1|L5|A|915
9P9K|1|L5|C|916
9P9K|1|L5|A|917
9P9K|1|L5|G|918
9P9K|1|L5|C|919

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LM

60S ribosomal protein L14

Chain LS

60S ribosomal protein L18a