IL_9PA7_036

3D structure

PDB id

9PA7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human 80S consensus ribosome with EBP1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.67 Å

Loop

Sequence

GAAGGUGG*UGUUACAGC

Length

17 nucleotides

Bulged bases

9PA7|1|L5|G|748, 9PA7|1|L5|C|916

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PA7|1|L5|G|745
9PA7|1|L5|A|746
9PA7|1|L5|A|747
9PA7|1|L5|G|748
9PA7|1|L5|G|749
9PA7|1|L5|U|750
9PA7|1|L5|G|751
9PA7|1|L5|G|752
*
9PA7|1|L5|U|911
9PA7|1|L5|G|912
9PA7|1|L5|U|913
9PA7|1|L5|U|914
9PA7|1|L5|A|915
9PA7|1|L5|C|916
9PA7|1|L5|A|917
9PA7|1|L5|G|918
9PA7|1|L5|C|919

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LM

60S ribosomal protein L14

Chain LS

60S ribosomal protein L18a