IL_9PKG_230

3D structure

PDB id

9PKG (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human P state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.26 Å

Loop

Sequence

GUAU*AGAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PKG|1|S2|G|942
9PKG|1|S2|U|943
9PKG|1|S2|A|944
9PKG|1|S2|U|945
*
9PKG|1|S2|A|981
9PKG|1|S2|G|982
9PKG|1|S2|A|983
9PKG|1|S2|C|984

Current chains

Chain S2

18S rRNA

Nearby chains

Chain LA

60S ribosomal protein L8

Chain SB

40S ribosomal protein S3a

Chain SO

Small ribosomal subunit protein uS11