IL_9PR4_035

3D structure

PDB id

9PR4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In Situ Structure of the Human Mitochondrial Large Subunit 39S in Complex with TACO1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

GC*GUAU

Length

6 nucleotides

Bulged bases

9PR4|1|A|U|2628, 9PR4|1|A|A|2629

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9PR4_035 not in the Motif Atlas

Geometric match to IL_8ZAU_001

Geometric discrepancy: 0.1341

The information below is about IL_8ZAU_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_05670.1

Basepair signature

cWW-cWW

Number of instances in this motif group

9

Unit IDs

9PR4|1|A|G|2596
9PR4|1|A|C|2597
*
9PR4|1|A|G|2627
9PR4|1|A|U|2628
9PR4|1|A|A|2629
9PR4|1|A|U|2630

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains