IL_9PR4_059
3D structure
- PDB id
- 9PR4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In Situ Structure of the Human Mitochondrial Large Subunit 39S in Complex with TACO1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.77 Å
Loop
- Sequence
- CCUAC*GCG
- Length
- 8 nucleotides
- Bulged bases
- 9PR4|1|A|C|3162
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9PR4_059 not in the Motif Atlas
- Geometric match to IL_8OI5_117
- Geometric discrepancy: 0.1562
- The information below is about IL_8OI5_117
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_06671.1
- Basepair signature
- cWW-L-cWW-L-L
- Number of instances in this motif group
- 10
Unit IDs
9PR4|1|A|C|3148
9PR4|1|A|C|3149
9PR4|1|A|U|3150
9PR4|1|A|A|3151
9PR4|1|A|C|3152
*
9PR4|1|A|G|3161
9PR4|1|A|C|3162
9PR4|1|A|G|3163
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain E
- 39S ribosomal protein L3, mitochondrial
- Chain L
- 39S ribosomal protein L14, mitochondrial
- Chain O
- 39S ribosomal protein L17, mitochondrial
- Chain Q
- 39S ribosomal protein L19, mitochondrial
Coloring options: