IL_9Q3R_128
3D structure
- PDB id
- 9Q3R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Escherichia coli 70S ribosome bound to mRNA, P-site fMet-tRNAfMet, glycyl-tRNAGly in A/T conformation, EF-Tu-GDPCP, and bottromycin at 1.99A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.99 Å
Loop
- Sequence
- GGAUAAC*GCUAAUAC
- Length
- 15 nucleotides
- Bulged bases
- 9Q3R|1|a|U|173
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9Q3R_128 not in the Motif Atlas
- Homologous match to IL_8B0X_012
- Geometric discrepancy: 0.081
- The information below is about IL_8B0X_012
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_24485.3
- Basepair signature
- cWW-cWW-tWH-tWH-tHW-tHW-cWW
- Number of instances in this motif group
- 4
Unit IDs
9Q3R|1|a|G|147
9Q3R|1|a|G|148
9Q3R|1|a|A|149
9Q3R|1|a|U|150
9Q3R|1|a|A|151
9Q3R|1|a|A|152
9Q3R|1|a|C|153
*
9Q3R|1|a|G|168
9Q3R|1|a|C|169
9Q3R|1|a|U|170
9Q3R|1|a|A|171
9Q3R|1|a|A|172
9Q3R|1|a|U|173
9Q3R|1|a|A|174
9Q3R|1|a|C|175
Current chains
- Chain a
- 16S Ribosomal RNA
Nearby chains
- Chain t
- Small ribosomal subunit protein bS20
Coloring options: