IL_9Q6R_337
3D structure
- PDB id
- 9Q6R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with pleuromutilin-27 triazole derivative and protein Y at 2.85A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.85 Å
Loop
- Sequence
- CGGAUU*AUGAAG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9Q6R_337 not in the Motif Atlas
- Homologous match to IL_8B0X_056
- Geometric discrepancy: 0.0918
- The information below is about IL_8B0X_056
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_28265.2
- Basepair signature
- cWW-tSH-tSH-tHS-cWW-cWW
- Number of instances in this motif group
- 9
Unit IDs
9Q6R|1|2a|C|1303
9Q6R|1|2a|G|1304
9Q6R|1|2a|G|1305
9Q6R|1|2a|A|1306
9Q6R|1|2a|U|1307
9Q6R|1|2a|U|1308
*
9Q6R|1|2a|A|1329
9Q6R|1|2a|U|1330
9Q6R|1|2a|G|1331
9Q6R|1|2a|A|1332
9Q6R|1|2a|A|1333
9Q6R|1|2a|G|1334
Current chains
- Chain 2a
- 16S Ribosomal RNA
Nearby chains
- Chain 2m
- 30S ribosomal protein S13
- Chain 2u
- 30S ribosomal protein Thx
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