IL_9QEG_049

3D structure

PDB id

9QEG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 70S ribosome of a MLSb sensitive S. aureus strain "KES34" in complex with solithromycin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

AUAG*UGAUU

Length

9 nucleotides

Bulged bases

9QEG|1|A|U|1601

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9QEG_049 not in the Motif Atlas

Homologous match to IL_9DFE_056

Geometric discrepancy: 0.1766

The information below is about IL_9DFE_056

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_74317.1

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

8

Unit IDs

9QEG|1|A|A|1481
9QEG|1|A|U|1482
9QEG|1|A|A|1483
9QEG|1|A|G|1484
*
9QEG|1|A|U|1598
9QEG|1|A|G|1599
9QEG|1|A|A|1600
9QEG|1|A|U|1601
9QEG|1|A|U|1602

Current chains

Chain A

23S ribosomal RNA

Nearby chains