IL_9QEG_085

3D structure

PDB id

9QEG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 70S ribosome of a MLSb sensitive S. aureus strain "KES34" in complex with solithromycin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

CG*CAG

Length

5 nucleotides

Bulged bases

9QEG|1|A|A|2629

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9QEG_085 not in the Motif Atlas

Geometric match to IL_9AXU_106

Geometric discrepancy: 0.0928

The information below is about IL_9AXU_106

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_14190.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

134

Unit IDs

9QEG|1|A|C|2618
9QEG|1|A|G|2619
*
9QEG|1|A|C|2628
9QEG|1|A|A|2629
9QEG|1|A|G|2630

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 8

Transfer RNA; tRNA

Chain C

Large ribosomal subunit protein uL2