IL_9QEG_107

3D structure

PDB id

9QEG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 70S ribosome of a MLSb sensitive S. aureus strain "KES34" in complex with solithromycin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

UUC*GA

Length

5 nucleotides

Bulged bases

9QEG|1|Aa|U|376

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9QEG_107 not in the Motif Atlas

Homologous match to IL_4LFB_014

Geometric discrepancy: 0.08

The information below is about IL_4LFB_014

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_97561.3

Basepair signature

cWW-L-cWW

Number of instances in this motif group

147

Unit IDs

9QEG|1|Aa|U|375
9QEG|1|Aa|U|376
9QEG|1|Aa|C|377
*
9QEG|1|Aa|G|400
9QEG|1|Aa|A|401

Current chains

Chain Aa

16S ribosomal RNA

Nearby chains

Chain Ap

Small ribosomal subunit protein bS16